After some conversation with Roozbeh which are "irritatingly useful" :) I found that this site has done already all the calculations we need http://www.scimagojr.com/  except the list of highlycited papers which remains for me the most interesting aspect and which we seem to need to do manually as we did yesterday with IJSS and JMPS at Most cited papers and H-factor of some mechanics journals -- IJSS

Some results are attached as a big PDF file.